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last()
- Method in class baobab.bio.permutation.colinearity.
LinkPermutationToColinearBlock
lastElement()
- Method in class baobab.util.
CompressibleSortedSet
Gets the last element in this set
lastElement()
- Method in class baobab.util.
FreezableCompressibleSortedSet
Gets the last element in this set
lastPoint()
- Method in class baobab.bio.permutation.
BPGraphCyclePartition
length()
- Method in class baobab.bio.permutation.
BPGraphReversalBlock
Gets the length of the block (the number of values of the permutation between its start and end points)
length()
- Method in class baobab.util.
BitList
linearAssignement(int[][], int[], int)
- Static method in class baobab.trace.
TraceWidth
LinkPermutationToColinearBlock
- Class in
baobab.bio.permutation.colinearity
LinkPermutationToColinearBlock(ColinearBlock, ColinearPermutation, int, int, boolean)
- Constructor for class baobab.bio.permutation.colinearity.
LinkPermutationToColinearBlock
listAsCondensedString(BitList, String[], char, boolean)
- Static method in class baobab.util.
Util
listAsCondensedString(BitList, String[], Hashtable<String, TreeSet<String>>, char, boolean)
- Static method in class baobab.util.
Util
listAsCondensedString(BitList, int, char)
- Static method in class baobab.util.
Util
listBreakpoints
- Class in
baobab.exec.permutation
listBreakpoints()
- Constructor for class baobab.exec.permutation.
listBreakpoints
listBreakpointsByName
- Class in
baobab.exec.permutation
listBreakpointsByName()
- Constructor for class baobab.exec.permutation.
listBreakpointsByName
listToBoundaries(int[], boolean, int[])
- Static method in class baobab.bio.permutation.
IntervalUtil
listToBoundaries(PermutationBPGraph, int[])
- Static method in class baobab.bio.permutation.
IntervalUtil
listToBoundaries(PermutationBPGraph, BitList)
- Static method in class baobab.bio.permutation.
IntervalUtil
Generates a reversal from a trace element
locateCoorientedIntervals
- Class in
baobab.exec.permutation
locateCoorientedIntervals()
- Constructor for class baobab.exec.permutation.
locateCoorientedIntervals
locateStrata
- Class in
baobab.exec.strata
locateStrata()
- Constructor for class baobab.exec.strata.
locateStrata
log(String)
- Method in class baobab.applogic.
AppLogicUtil
LONG_TO_BYTES
- Static variable in class baobab.util.
Bytes
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