Constant Field Values


Contents
baobab.bio.*

baobab.bio.permutation.PerfectReversalConstraint
public static final int MAX_SCORE_NON_PERFECT_REVERSAL 2

baobab.bio.permutation.ReversalConstraint
public static final int MAX_PRIORITY 0

baobab.bio.permutation.SignedBPGraphReversalBlock
public static final int JOIN_CYCLES 3
public static final int KEEP_CYCLE 2
public static final int SPLIT_CYCLE 1

baobab.bio.permutation.TerminusSymmetryReversalConstraint
public static final int ASYMMETRIC_REVERSAL -1
public static final int EXTERNAL_REVERSAL 0
public static final int SYMMETRIC_REVERSAL 1

baobab.exec.*

baobab.exec.trace.computeTracesByReversal
public static final double MIN_SIMILARITY 0.95

baobab.exec.trace.computeTracesByReversalForNonCanonizedPermutations
public static final double MIN_SIMILARITY 0.95

baobab.util.*

baobab.util.Bytes
public static final int INT_TO_BYTES 4
public static final int LONG_TO_BYTES 8

baobab.util.CompressibleSortedSet<T>
public static final double BLOCK_SPLIT_BALANCE 0.5
public static final int MAXIMUM_NUMBER_OF_ELEMENTS_BY_COMPRESSIBLE_BLOCK 3000
public static final int MAXIMUM_NUMBER_OF_UNCOMPRESSED_BLOCKS_FOR_AUTOMATIC_COMPRESSION 400
public static final int MAXIMUM_PENDING_INSERTION_DELETION_LIST_FOR_COMPRESSED_BLOCK 200