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Uses of Point in baobab.bio.permutation |
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Methods in baobab.bio.permutation that return Point | |
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Point |
CyclePartition.firstPoint()
|
Point |
SignedComponent.getEndPoint()
Gets the end point of this component in the permutation |
Point |
SignedPermutation.getEndPoint()
Gets the end point of the permutation |
Point |
Cycle.getEndPoint()
Gets the end point of this cycle in the permutation |
Point |
UnsignedPermutation.getEndPoint()
Gets the end point of the permutation |
Point |
SignedCycle.getEndPoint()
Gets the end point of this cycle in the permutation |
Point[] |
Point.getNeighbors()
Gets the neighbors of this point in the permutation |
Point |
Point.getNextPoint()
|
Point |
Permutation.getPointAt(int pos)
Gets a point at a specific position of the permutation |
Point |
SignedPermutation.getPointAt(int pos)
Gets a point at a specific position of the permutation |
Point |
UnsignedPermutation.getPointAt(int pos)
Gets a point at a specific position of the permutation |
Point |
Point.getPreviousPoint()
|
Point |
SignedComponent.getStartPoint()
Gets the start point of this component in the permutation |
Point |
SignedPermutation.getStartPoint()
Gets the start point of the permutation |
Point |
Cycle.getStartPoint()
Gets the start point of this cycle in the permutation |
Point |
UnsignedPermutation.getStartPoint()
Gets the start point of the permutation |
Point |
SignedCycle.getStartPoint()
Gets the start point of this cycle in the permutation |
Point |
CyclePartition.lastPoint()
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Methods in baobab.bio.permutation that return types with arguments of type Point | |
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java.util.SortedSet<Point> |
Cycle.getBreakpoints()
Gets the breakpoint list of this cycle |
java.util.SortedSet<Point> |
CyclePartition.getPoints()
Gets the list of points of this cycle partition |
java.util.SortedSet<Point> |
Cycle.getPoints()
Gets the points of this cycle sorted in ascendant order |
java.util.Iterator<Point> |
Cycle.getPointsAsCycle()
Gets the points of this cycle ordered as a cycle |
Methods in baobab.bio.permutation with parameters of type Point | |
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boolean |
Point.isNeighborOf(Point point)
Tests whether this point is a neighbor of a given point |
SignedPermutation |
SignedPermutation.revert(Point start,
Point end)
Reverts the permutation between the specified points |
UnsignedPermutation |
UnsignedPermutation.revert(Point start,
Point end)
Reverts the permutation between the specified points |
SignedPermutation |
ComplexSignedPermutation.revert(Point start,
Point end)
Reverts the permutation between the specified points |
SignedPermutation |
SignedPermutation.revertToNewPermutation(Point start,
Point end)
Make a new permutation, by reverting the permutation between the specified positions |
UnsignedPermutation |
UnsignedPermutation.revertToNewPermutation(Point start,
Point end)
Make a new permutation, by reverting the permutation between the specified positions |
SignedPermutation |
ComplexSignedPermutation.revertToNewPermutation(Point start,
Point end)
Make a new permutation, by reverting the permutation between the specified positions |
UnsignedPermutation |
UnsignedPermutation.transposeToNewPermutation(Point start,
Point middle,
Point end)
Make a new permutation, by transposing the permutation between the specified positions |
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