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P

performReversals - Class in baobab.exec.permutation
 
performReversals() - Constructor for class baobab.exec.permutation.performReversals
 
Permutation - Interface in baobab.bio.permutation
The Permutation interface represents a general permutation
PermutationException - Exception in baobab.bio.permutation
The PermutationException class represents an exception on permutation dealing
PermutationException(String) - Constructor for exception baobab.bio.permutation.PermutationException
 
PermutationException(String, Throwable) - Constructor for exception baobab.bio.permutation.PermutationException
 
PermutationFormatter - Class in baobab.bio.permutation
The PermutationFormatter class transforms a permutation to formatted strings
PermutationToTrace - Class in baobab.bio.permutation
The PermutationToTrace class contains utility methods which convert permutation elements to trace elements and vice-versa
PermutationToTrace() - Constructor for class baobab.bio.permutation.PermutationToTrace
 
PermutationUtil - Class in baobab.bio.permutation
The PermutationUtil class contains utility methods which deal with permutations as arrays of int
PermutationUtil() - Constructor for class baobab.bio.permutation.PermutationUtil
 
Point - Class in baobab.bio.permutation
The Point class represents a point between two values of a permutation
printLightTraceRules(Vector, int, int) - Static method in class baobab.trace.TraceUtil
 

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