Uses of Class
baobab.bio.permutation.BPGraphReversalBlock

Packages that use BPGraphReversalBlock
baobab.bio.permutation   
 

Uses of BPGraphReversalBlock in baobab.bio.permutation
 

Subclasses of BPGraphReversalBlock in baobab.bio.permutation
 class BPGraphTranspositionBlock
          The BPGraphTranspositionBlock class represents an elementary block of a permutation, given by its start, middle and end points, which can be used as the breakpoints of a transposition
 class SignedBPGraphReversalBlock
          The SignedBPGraphReversalBlock class represents an elementary block of a signed permutation, given by its start and end points, which can be used as the breakpoints of a signed reversal
 

Methods in baobab.bio.permutation with parameters of type BPGraphReversalBlock
 int BPGraphReversalBlockComparator.compare(BPGraphReversalBlock block1, BPGraphReversalBlock block2)
          Compares two blocks
 SignedPermutationBPGraph ComplexSignedPermutationBPGraph.revert(BPGraphReversalBlock block)
          Reverts the specified block of the permutation
 SignedPermutationBPGraph SignedPermutationBPGraph.revert(BPGraphReversalBlock block)
          Reverts the specified block of the permutation
 UnsignedPermutationBPGraph UnsignedPermutationBPGraph.revert(BPGraphReversalBlock block)
          Reverts the specified block of the permutation