Uses of Class
baobab.bio.permutation.colinearity.ColinearBlock

Packages that use ColinearBlock
baobab.bio.permutation.colinearity   
 

Uses of ColinearBlock in baobab.bio.permutation.colinearity
 

Methods in baobab.bio.permutation.colinearity that return ColinearBlock
 ColinearBlock LinkPermutationToColinearBlock.getBlock()
           
 

Methods in baobab.bio.permutation.colinearity with parameters of type ColinearBlock
 int ColinearPermutation.autoStart(boolean confirm, ColinearBlock block)
           
 LinkPermutationToColinearBlock ColinearPermutation.closeColinearBlock(ColinearBlock b)
           
 void ColinearPermutation.confirmPosition(int pos, ColinearBlock block)
           
 boolean ColinearPermutation.start(java.lang.String refValue, boolean isRefReversed, ColinearBlock block)
           
 

Constructors in baobab.bio.permutation.colinearity with parameters of type ColinearBlock
LinkPermutationToColinearBlock(ColinearBlock b, ColinearPermutation p, int first, int last, boolean isReversed)