A B C D E F G H I J K L M N O P Q R S T U V W

D

decode(byte[][], int, int, int, int) - Method in class baobab.bio.permutation.counter.PermutationCounterCoder
 
decode(byte[][], int) - Method in class baobab.bio.permutation.counter.PermutationCounterCoder
 
decode(byte[][]) - Method in class baobab.trace.SubTraceCoder
 
decode(byte[][], int, int, int, int, int, int, int, int) - Method in class baobab.trace.SubTraceCoder
 
decode(byte[][], int) - Method in class baobab.trace.SubTraceCoder
 
decode(byte[][]) - Method in class baobab.trace.TraceCoder
 
decode(byte[][], int, int, int, int) - Method in class baobab.trace.TraceCoder
 
decode(byte[][], int) - Method in class baobab.trace.TraceCoder
 
decode(byte[][], int) - Method in interface baobab.util.Coder
Decodes a bidimensional array of bytes as a vector of objects.
decodeTraces(int, int, int, int, int, int, boolean) - Method in class baobab.applogic.trace.TraceAppLogicUtil
 
decodeTraces - Class in baobab.exec.trace
 
decodeTraces() - Constructor for class baobab.exec.trace.decodeTraces
 
decompose() - Method in class baobab.bio.permutation.ComplexSignedPermutationBPGraph
Decompose this graph in its components + adajacencies to replace other components
DecomposedTrace - Class in baobab.trace
The DecomposedTrace class represents a decomposed trace.
DecomposedTrace(int[], Trace[], int) - Constructor for class baobab.trace.DecomposedTrace
Constructs a DecomposedTrace
decomposeSignedPermutation - Class in baobab.exec.permutation
Decomposes the breakpoint graph, generating a new breakpoint graph for each big component (non adjacency).
decomposeSignedPermutation() - Constructor for class baobab.exec.permutation.decomposeSignedPermutation
 
decompressBytes(byte[]) - Static method in class baobab.util.Util
 
decompressBytes(byte[], int, byte[]) - Static method in class baobab.util.Util
 
descendingIterator() - Method in class baobab.util.CompressibleSortedSet
Gets a descending iterator of this set.
descendingIterator() - Method in class baobab.util.FreezableCompressibleSortedSet
 
diffTraces(int, int, boolean, TraceSortedSet, String, String) - Method in class baobab.applogic.trace.TraceAppLogicUtil
 
diffTraces - Class in baobab.exec.trace
 
diffTraces() - Constructor for class baobab.exec.trace.diffTraces
 

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