baobab.bio.permutation
Class WeightedSignedPermutationBPGraphReversalFilter

java.lang.Object
  extended by baobab.bio.permutation.SignedPermutationBPGraphReversalFilter
      extended by baobab.bio.permutation.WeightedSignedPermutationBPGraphReversalFilter

public class WeightedSignedPermutationBPGraphReversalFilter
extends SignedPermutationBPGraphReversalFilter

The WeightedSignedPermutationBPGraphReversalFilter filters valid reversal blocks for a WeightedSignedPermutationBPGraph

Version:
1.0, June 2006
Author:
Marilia D. V. Braga

Method Summary
 int[] getHeaviestLongestReversal()
          Gets the heaviest reversal
 
Methods inherited from class baobab.bio.permutation.SignedPermutationBPGraphReversalFilter
getContainerReversalsStartingAfter, getCycleSplittingReversals, getCycleSplittingReversalsAsArraysOfInt, getCycleSplittingReversalsBetweenIntervals, getCycleSplittingReversalsBetweenIntervalsAsArraysOfInt, getCycleSplittingReversalsStartingAt, getCycleSplittingReversalsWithinIntervals, getCycleSplittingReversalsWithinIntervalsAsArraysOfInt, getFirstShortestReversalStartingAfter, getLastLongestReversalStartingAfter, getLongestCycleSplittingReversalStartingAt, getLongestReversalStartingAt, getPermutation, getReversalsStartingAt, getShortestContainerReversalStartingAfter
 
Methods inherited from class java.lang.Object
equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
 

Method Detail

getHeaviestLongestReversal

public int[] getHeaviestLongestReversal()
Gets the heaviest reversal

Returns:
a reversal block